STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Anxa10Annexin A10. (324 aa)    
Predicted Functional Partners:
Ccdc14
Similar to CCDC14 protein (Predicted), isoform CRA_a.
    
 
 0.635
Matn1
Matrilin 1, cartilage matrix protein.
   
 
 0.605
Tff2
Trefoil factor 2; Inhibits gastrointestinal motility and gastric acid secretion. Could function as a structural component of gastric mucus, possibly by stabilizing glycoproteins in the mucus gel through interactions with carbohydrate side chains.
   
  
 0.562
Edc3
Enhancer of mRNA-decapping 3.
   
   0.545
Tmem88b
Transmembrane protein 88B.
      
 0.522
Thtpa
Thiamine-triphosphatase; Hydrolase highly specific for thiamine triphosphate (ThTP).
   
  
 0.510
Smc6
SMC6 structural maintenance of chromosomes 6-like 1 (Yeast) (Predicted).
      
 0.496
Spock3
SPARC/osteonectin, cwcv and kazal-like domains proteoglycan 3.
      
 0.468
Rps6kl1
Ribosomal protein S6 kinase-like 1.
    
 
 0.466
Gpr151
Probable G-protein coupled receptor 151; Orphan receptor.
      
 0.464
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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