STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ggta1l1N-acetyllactosaminide alpha-1,3-galactosyltransferase-like 1; Synthesizes the galactose-alpha(1,3)-galactose group by catalyzing the transfer of a galactose residue, with an alpha-1,3 linkage, on terminal lactosaminide (Gal-beta-1,4-GlcNAc-R) disaccharide borne by a glycoprotein or a glycolipid. (321 aa)    
Predicted Functional Partners:
Dipk1b
Divergent protein kinase domain 1B; Belongs to the DIPK family.
      
 0.747
Stpg3
Similar to hypothetical gene supported by AK097565; BC033939, isoform CRA_a.
   
  
 0.737
Ttll11
Ttll11 protein.
      
 0.696
Fam83e
Family with sequence similarity 83, member E.
      
 0.660
Lcn6
Epididymal-specific lipocalin ELP16; Belongs to the calycin superfamily. Lipocalin family.
      
 0.635
Obp2b
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
      
 0.624
Lcn9
Lipocalin 9 (Predicted); Belongs to the calycin superfamily. Lipocalin family.
      
 0.614
Mrps2
Mitochondrial ribosomal protein S2.
      
 0.613
Prss58
Putative inactive serine protease 58; Belongs to the peptidase S1 family.
   
  
 0.599
Sppl2c
Signal peptide peptidase-like 2C.
   
  
 0.597
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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