STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Wdr70WD repeat-containing protein 70; Belongs to the WD repeat GAD-1 family. (655 aa)    
Predicted Functional Partners:
Dhx38
DEAH-box helicase 38.
 
 
 0.968
Cwc22
CWC22 spliceosome-associated protein homolog.
   
 0.957
Cdc40
Cell division cycle 40.
   
  0.944
Ppwd1
Peptidylprolyl isomerase domain and WD repeat containing 1 (Predicted).
   
 0.910
Ppil1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.904
Bud31
Protein BUD31 homolog; Involved in the pre-mRNA splicing process. May play a role as regulator of AR transcriptional activity; may increase AR transcriptional activity; Belongs to the BUD31 (G10) family.
   
 
 0.903
Cwc25
CWC25 spliceosome-associated protein homolog.
    
  0.901
Syf2
Pre-mRNA-splicing factor SYF2; Involved in pre-mRNA splicing as component of the spliceosome.
    
  0.901
Yju2
Coiled-coil domain containing 94.
    
  0.891
Srrm2
Serine/arginine repetitive matrix 2.
    
  0.864
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.