STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Crip3Similar to thymus LIM protein TLP-B (Predicted), isoform CRA_a. (204 aa)    
Predicted Functional Partners:
Smim12
Small integral membrane protein 12.
      
 0.614
Zfp438
Zinc finger protein 438.
      
 0.582
Hint3
Histidine triad nucleotide-binding protein 3; Hydrolyzes phosphoramidate and acyl-adenylate substrates.
      
 0.581
Tmc7
Transmembrane channel-like protein.
      
 0.581
Kiaa1107
AP2-interacting clathrin-endocytosis protein; Involved in clathrin-mediated endocytosis at the synapse. Plays a role in neuronal development and in synaptic vesicle recycling in mature neurons, a process required for normal synaptic transmission.
   
  
 0.580
Tcaim
T-cell activation inhibitor, mitochondrial; May regulate T-cell apoptosis.
      
 0.571
Bend7
BEN domain-containing 7.
      
 0.571
Lrrc40
Leucine-rich repeat-containing 40.
      
 0.570
Sh3d21
SH3 domain-containing 21.
      
 0.564
Aamdc
Similar to RIKEN cDNA 1810020D17 (Predicted), isoform CRA_a.
      
 0.539
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.