Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC690826 | Rnf180 | ENSRNOP00000027164 | ENSRNOP00000059648 | Protocadherin beta-7-like. | Ring finger protein 180. | 0.536 |
Pcdhb4 | Pcdhb8 | ENSRNOP00000027210 | ENSRNOP00000027190 | Protocadherin beta 4. | Protocadherin beta 8. | 0.840 |
Pcdhb4 | Rnf180 | ENSRNOP00000027210 | ENSRNOP00000059648 | Protocadherin beta 4. | Ring finger protein 180. | 0.531 |
Pcdhb8 | Pcdhb4 | ENSRNOP00000027190 | ENSRNOP00000027210 | Protocadherin beta 8. | Protocadherin beta 4. | 0.840 |
Pcdhb8 | Rnf180 | ENSRNOP00000027190 | ENSRNOP00000059648 | Protocadherin beta 8. | Ring finger protein 180. | 0.529 |
Pnma2 | Rnf180 | ENSRNOP00000013001 | ENSRNOP00000059648 | PNMA family member 2. | Ring finger protein 180. | 0.556 |
Pnma2 | Zfp706 | ENSRNOP00000013001 | ENSRNOP00000071758 | PNMA family member 2. | Zinc finger protein 706. | 0.402 |
Ppwd1 | Rnf180 | ENSRNOP00000016863 | ENSRNOP00000059648 | Peptidylprolyl isomerase domain and WD repeat containing 1 (Predicted). | Ring finger protein 180. | 0.637 |
Ppwd1 | Shisal2b | ENSRNOP00000016863 | ENSRNOP00000017869 | Peptidylprolyl isomerase domain and WD repeat containing 1 (Predicted). | Shisa-like 2B. | 0.634 |
Ppwd1 | Srek1ip1 | ENSRNOP00000016863 | ENSRNOP00000064069 | Peptidylprolyl isomerase domain and WD repeat containing 1 (Predicted). | Protein SREK1IP1; Possible splicing regulator involved in the control of cellular survival. | 0.695 |
Rnf103 | Rnf180 | ENSRNOP00000062726 | ENSRNOP00000059648 | E3 ubiquitin-protein ligase RNF103; Acts as an E2-dependent E3 ubiquitin-protein ligase, probably involved in the ER-associated protein degradation pathway. | Ring finger protein 180. | 0.539 |
Rnf180 | LOC690826 | ENSRNOP00000059648 | ENSRNOP00000027164 | Ring finger protein 180. | Protocadherin beta-7-like. | 0.536 |
Rnf180 | Pcdhb4 | ENSRNOP00000059648 | ENSRNOP00000027210 | Ring finger protein 180. | Protocadherin beta 4. | 0.531 |
Rnf180 | Pcdhb8 | ENSRNOP00000059648 | ENSRNOP00000027190 | Ring finger protein 180. | Protocadherin beta 8. | 0.529 |
Rnf180 | Pnma2 | ENSRNOP00000059648 | ENSRNOP00000013001 | Ring finger protein 180. | PNMA family member 2. | 0.556 |
Rnf180 | Ppwd1 | ENSRNOP00000059648 | ENSRNOP00000016863 | Ring finger protein 180. | Peptidylprolyl isomerase domain and WD repeat containing 1 (Predicted). | 0.637 |
Rnf180 | Rnf103 | ENSRNOP00000059648 | ENSRNOP00000062726 | Ring finger protein 180. | E3 ubiquitin-protein ligase RNF103; Acts as an E2-dependent E3 ubiquitin-protein ligase, probably involved in the ER-associated protein degradation pathway. | 0.539 |
Rnf180 | Rnf38 | ENSRNOP00000059648 | ENSRNOP00000074615 | Ring finger protein 180. | Ring finger protein 38, isoform CRA_a. | 0.571 |
Rnf180 | Shisal2b | ENSRNOP00000059648 | ENSRNOP00000017869 | Ring finger protein 180. | Shisa-like 2B. | 0.634 |
Rnf180 | Srek1ip1 | ENSRNOP00000059648 | ENSRNOP00000064069 | Ring finger protein 180. | Protein SREK1IP1; Possible splicing regulator involved in the control of cellular survival. | 0.697 |
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