STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mfsd14bHippocampus abundant transcript-like protein 1. (507 aa)    
Predicted Functional Partners:
Mfsd6
Similar to expressed sequence AW212394 (Predicted).
   
  
 0.740
Mfsd3
Major facilitator superfamily domain-containing protein 3.
   
  
 0.723
Mfsd12
Major facilitator superfamily domain-containing 12.
      
 0.723
Mfsd11
Major facilitator superfamily domain-containing 11.
      
 0.714
Mfsd9
Major facilitator superfamily domain-containing 9.
   
  
 0.710
Slc37a3
Solute carrier family 37 (Glycerol-3-phosphate transporter), member 3 (Predicted), isoform CRA_b.
   
  
 0.708
Mfsd6l
Major facilitator superfamily domain-containing 6-like.
      
 0.694
Mfsd5
Major facilitator superfamily domain-containing 5.
   
  
 0.680
Lrrc71
Leucine-rich repeat-containing 71.
      
 0.674
Mfsd13a
Major facilitator superfamily domain-containing 13A.
      
 0.671
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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