Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ccdc189 | Cfap221 | ENSRNOP00000070647 | ENSRNOP00000071581 | Coiled-coil domain-containing 189. | Cilia and flagella-associated protein 221. | 0.540 |
Ccdc189 | Cfap69 | ENSRNOP00000070647 | ENSRNOP00000009264 | Coiled-coil domain-containing 189. | Cilia and flagella-associated protein 69. | 0.528 |
Ccdc189 | Cfap74 | ENSRNOP00000070647 | ENSRNOP00000062897 | Coiled-coil domain-containing 189. | Cilia and flagella-associated protein 74. | 0.487 |
Ccdc189 | Dpy30 | ENSRNOP00000070647 | ENSRNOP00000070382 | Coiled-coil domain-containing 189. | Protein dpy-30 homolog; As part of the MLL1/MLL complex, involved in the methylation of histone H3 at 'Lys-4', particularly trimethylation. Histone H3 'Lys- 4' methylation represents a specific tag for epigenetic transcriptional activation. May play some role in histone H3 acetylation. In embryonic stem cells, may play a crucial role in retinoic acid-induced differentiation along the neural lineage, regulating gene induction and H3 'Lys-4' methylation at key developmental loci. May also play an indirect or direct role in endosomal transport (By similarity). | 0.723 |
Ccdc189 | F1M3N3_RAT | ENSRNOP00000070647 | ENSRNOP00000061851 | Coiled-coil domain-containing 189. | Uncharacterized protein. | 0.529 |
Ccdc189 | Lrguk | ENSRNOP00000070647 | ENSRNOP00000011692 | Coiled-coil domain-containing 189. | Leucine-rich repeats and guanylate kinase domain-containing. | 0.794 |
Ccdc189 | Mycbp | ENSRNOP00000070647 | ENSRNOP00000023354 | Coiled-coil domain-containing 189. | Myc-binding protein. | 0.603 |
Ccdc189 | Polr3c | ENSRNOP00000070647 | ENSRNOP00000028815 | Coiled-coil domain-containing 189. | DNA-directed RNA polymerase III subunit RPC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. May direct with other members of the subcomplex RNA Pol III binding to the TFIIIB-DNA complex via the interactions between TFIIIB and POLR3F. May be involved either in the recruitment and stabilization of the subcomplex within RNA polymerase III, or in stimulating catalytic functions of other subunits during i [...] | 0.528 |
Ccdc189 | Spag17 | ENSRNOP00000070647 | ENSRNOP00000044489 | Coiled-coil domain-containing 189. | Sperm-associated antigen 17. | 0.630 |
Cfap221 | Ccdc189 | ENSRNOP00000071581 | ENSRNOP00000070647 | Cilia and flagella-associated protein 221. | Coiled-coil domain-containing 189. | 0.540 |
Cfap221 | Cfap69 | ENSRNOP00000071581 | ENSRNOP00000009264 | Cilia and flagella-associated protein 221. | Cilia and flagella-associated protein 69. | 0.528 |
Cfap221 | Cfap74 | ENSRNOP00000071581 | ENSRNOP00000062897 | Cilia and flagella-associated protein 221. | Cilia and flagella-associated protein 74. | 0.577 |
Cfap221 | Dpy30 | ENSRNOP00000071581 | ENSRNOP00000070382 | Cilia and flagella-associated protein 221. | Protein dpy-30 homolog; As part of the MLL1/MLL complex, involved in the methylation of histone H3 at 'Lys-4', particularly trimethylation. Histone H3 'Lys- 4' methylation represents a specific tag for epigenetic transcriptional activation. May play some role in histone H3 acetylation. In embryonic stem cells, may play a crucial role in retinoic acid-induced differentiation along the neural lineage, regulating gene induction and H3 'Lys-4' methylation at key developmental loci. May also play an indirect or direct role in endosomal transport (By similarity). | 0.537 |
Cfap221 | F1M3N3_RAT | ENSRNOP00000071581 | ENSRNOP00000061851 | Cilia and flagella-associated protein 221. | Uncharacterized protein. | 0.577 |
Cfap221 | Lrguk | ENSRNOP00000071581 | ENSRNOP00000011692 | Cilia and flagella-associated protein 221. | Leucine-rich repeats and guanylate kinase domain-containing. | 0.770 |
Cfap221 | Polr3c | ENSRNOP00000071581 | ENSRNOP00000028815 | Cilia and flagella-associated protein 221. | DNA-directed RNA polymerase III subunit RPC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. May direct with other members of the subcomplex RNA Pol III binding to the TFIIIB-DNA complex via the interactions between TFIIIB and POLR3F. May be involved either in the recruitment and stabilization of the subcomplex within RNA polymerase III, or in stimulating catalytic functions of other subunits during i [...] | 0.528 |
Cfap221 | Spag17 | ENSRNOP00000071581 | ENSRNOP00000044489 | Cilia and flagella-associated protein 221. | Sperm-associated antigen 17. | 0.607 |
Cfap69 | Ccdc189 | ENSRNOP00000009264 | ENSRNOP00000070647 | Cilia and flagella-associated protein 69. | Coiled-coil domain-containing 189. | 0.528 |
Cfap69 | Cfap221 | ENSRNOP00000009264 | ENSRNOP00000071581 | Cilia and flagella-associated protein 69. | Cilia and flagella-associated protein 221. | 0.528 |
Cfap69 | Cfap74 | ENSRNOP00000009264 | ENSRNOP00000062897 | Cilia and flagella-associated protein 69. | Cilia and flagella-associated protein 74. | 0.502 |
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