Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cdca5 | Nipbl | ENSRNOP00000064620 | ENSRNOP00000071473 | Cell division cycle-associated 5. | Nipped-B protein. | 0.851 |
Cdca5 | Pds5a | ENSRNOP00000064620 | ENSRNOP00000003437 | Cell division cycle-associated 5. | Sister chromatid cohesion protein PDS5 homolog A; Probable regulator of sister chromatid cohesion in mitosis which may stabilize cohesin complex association with chromatin. May couple sister chromatid cohesion during mitosis to DNA replication. Cohesion ensures that chromosome partitioning is accurate in both meiotic and mitotic cells and plays an important role in DNA repair (By similarity). | 0.941 |
Cdca5 | Pds5b | ENSRNOP00000064620 | ENSRNOP00000063199 | Cell division cycle-associated 5. | Sister chromatid cohesion protein PDS5 homolog B; Regulator of sister chromatid cohesion in mitosis which may stabilize cohesin complex association with chromatin. May couple sister chromatid cohesion during mitosis to DNA replication. Cohesion ensures that chromosome partitioning is accurate in both meiotic and mitotic cells and plays an important role in DNA repair. Plays a role in androgen-induced proliferative arrest in prostate cells. | 0.930 |
Cdca5 | Rad21 | ENSRNOP00000064620 | ENSRNOP00000006209 | Cell division cycle-associated 5. | RAD21 cohesin complex component. | 0.864 |
Cdca5 | Smc1a | ENSRNOP00000064620 | ENSRNOP00000004364 | Cell division cycle-associated 5. | Structural maintenance of chromosomes protein 1A; Involved in chromosome cohesion during cell cycle and in DNA repair. Central component of cohesin complex. The cohesin complex is required for the cohesion of sister chromatids after DNA replication. The cohesin complex apparently forms a large proteinaceous ring within which sister chromatids can be trapped. At anaphase, the complex is cleaved and dissociates from chromatin, allowing sister chromatids to segregate. The cohesin complex may also play a role in spindle pole assembly during mitosis. Involved in DNA repair via its interacti [...] | 0.892 |
Cdca5 | Smc1b | ENSRNOP00000064620 | ENSRNOP00000043834 | Cell division cycle-associated 5. | Structural maintenance of chromosomes protein. | 0.778 |
Cdca5 | Smc3 | ENSRNOP00000064620 | ENSRNOP00000019560 | Cell division cycle-associated 5. | Structural maintenance of chromosomes protein 3; Central component of cohesin, a complex required for chromosome cohesion during the cell cycle. The cohesin complex may form a large proteinaceous ring within which sister chromatids can be trapped. At anaphase, the complex is cleaved and dissociates from chromatin, allowing sister chromatids to segregate. Cohesion is coupled to DNA replication and is involved in DNA repair. The cohesin complex plays also an important role in spindle pole assembly during mitosis and in chromosomes movement (By similarity). | 0.971 |
Cdca5 | Stag1 | ENSRNOP00000064620 | ENSRNOP00000074990 | Cell division cycle-associated 5. | Stromal antigen 1. | 0.862 |
Cdca5 | Stag2 | ENSRNOP00000064620 | ENSRNOP00000073004 | Cell division cycle-associated 5. | Stromal antigen 2. | 0.887 |
Cdca5 | Wapl | ENSRNOP00000064620 | ENSRNOP00000070173 | Cell division cycle-associated 5. | WAPL cohesin release factor. | 0.988 |
Nipbl | Cdca5 | ENSRNOP00000071473 | ENSRNOP00000064620 | Nipped-B protein. | Cell division cycle-associated 5. | 0.851 |
Nipbl | Pds5a | ENSRNOP00000071473 | ENSRNOP00000003437 | Nipped-B protein. | Sister chromatid cohesion protein PDS5 homolog A; Probable regulator of sister chromatid cohesion in mitosis which may stabilize cohesin complex association with chromatin. May couple sister chromatid cohesion during mitosis to DNA replication. Cohesion ensures that chromosome partitioning is accurate in both meiotic and mitotic cells and plays an important role in DNA repair (By similarity). | 0.976 |
Nipbl | Pds5b | ENSRNOP00000071473 | ENSRNOP00000063199 | Nipped-B protein. | Sister chromatid cohesion protein PDS5 homolog B; Regulator of sister chromatid cohesion in mitosis which may stabilize cohesin complex association with chromatin. May couple sister chromatid cohesion during mitosis to DNA replication. Cohesion ensures that chromosome partitioning is accurate in both meiotic and mitotic cells and plays an important role in DNA repair. Plays a role in androgen-induced proliferative arrest in prostate cells. | 0.975 |
Nipbl | Rad21 | ENSRNOP00000071473 | ENSRNOP00000006209 | Nipped-B protein. | RAD21 cohesin complex component. | 0.985 |
Nipbl | Smc1a | ENSRNOP00000071473 | ENSRNOP00000004364 | Nipped-B protein. | Structural maintenance of chromosomes protein 1A; Involved in chromosome cohesion during cell cycle and in DNA repair. Central component of cohesin complex. The cohesin complex is required for the cohesion of sister chromatids after DNA replication. The cohesin complex apparently forms a large proteinaceous ring within which sister chromatids can be trapped. At anaphase, the complex is cleaved and dissociates from chromatin, allowing sister chromatids to segregate. The cohesin complex may also play a role in spindle pole assembly during mitosis. Involved in DNA repair via its interacti [...] | 0.996 |
Nipbl | Smc1b | ENSRNOP00000071473 | ENSRNOP00000043834 | Nipped-B protein. | Structural maintenance of chromosomes protein. | 0.907 |
Nipbl | Smc3 | ENSRNOP00000071473 | ENSRNOP00000019560 | Nipped-B protein. | Structural maintenance of chromosomes protein 3; Central component of cohesin, a complex required for chromosome cohesion during the cell cycle. The cohesin complex may form a large proteinaceous ring within which sister chromatids can be trapped. At anaphase, the complex is cleaved and dissociates from chromatin, allowing sister chromatids to segregate. Cohesion is coupled to DNA replication and is involved in DNA repair. The cohesin complex plays also an important role in spindle pole assembly during mitosis and in chromosomes movement (By similarity). | 0.998 |
Nipbl | Stag1 | ENSRNOP00000071473 | ENSRNOP00000074990 | Nipped-B protein. | Stromal antigen 1. | 0.966 |
Nipbl | Stag2 | ENSRNOP00000071473 | ENSRNOP00000073004 | Nipped-B protein. | Stromal antigen 2. | 0.984 |
Nipbl | Wapl | ENSRNOP00000071473 | ENSRNOP00000070173 | Nipped-B protein. | WAPL cohesin release factor. | 0.977 |
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