STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100362409Odorant-binding protein; This protein is found in nasal epithelium and it binds a wide variety of chemical odorants. (172 aa)    
Predicted Functional Partners:
LOC690507
Vomeromodulin.
      
 0.730
Lcn11
Allergen Fel d 4-like; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.726
Obp2a
Odorant-binding protein 2A; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.686
Obp2b
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.644
Scgb2b2
Uncharacterized protein.
      
 0.584
Scgb1c1
Secretoglobin family 1C member 1; Belongs to the secretoglobin family.
      
 0.502
Sval2
Seminal vesicle antigen-like 2, isoform CRA_b.
  
  
 0.476
Fam20c
FAM20C, golgi-associated secretory pathway kinase.
      
 0.468
Lcn3
Lipocalin 3; Belongs to the calycin superfamily. Lipocalin family.
      
 0.462
Pomgnt2
Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2; O-linked mannose beta-1,4-N-acetylglucosaminyltransferase that transfers UDP-N-acetyl-D-glucosamine to the 4-position of the mannose to generate N-acetyl-D-glucosamine-beta-1,4-O-D- mannosylprotein. Involved in the biosynthesis of the phosphorylated O- mannosyl trisaccharide (N-acetylgalactosamine-beta-3-N- acetylglucosamine-beta-4-(phosphate-6-)mannose), a carbohydrate structure present in alpha-dystroglycan (DAG1), which is required for binding laminin G-like domain-containing extracellular proteins with high affini [...]
      
 0.446
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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