STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vom2r18Putative pheromone receptor. (866 aa)    
Predicted Functional Partners:
RGD1562229
Similar to hypothetical protein FLJ40298.
      
 0.783
Ly49si2-2
Immunoreceptor Ly49si3.
   
  
 0.748
RGD1563349
Similar to RIKEN cDNA 9330182L06.
    
 
 0.597
Ly49si2
Immunoreceptor Ly49si2.
   
  
 0.575
Ammecr1l
AMMECR1-like.
      
 0.571
Zfp26
Zinc finger protein 26.
      
 0.570
Borcs7
Similar to RIKEN cDNA 2010012O05 (Predicted).
   
  
 0.525
Man2a2
Alpha-mannosidase.
      
 0.506
Ceacam11
Carcinoembryonic antigen-related cell adhesion molecule 11.
  
   0.444
Pogk
Pogo transposable element-derived with KRAB domain.
   
  
 0.443
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.