STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SucoSUN domain-containing ossification factor; Required for bone modeling during late embryogenesis. Regulates type I collagen synthesis in osteoblasts during their postnatal maturation (By similarity). (1256 aa)    
Predicted Functional Partners:
Ttll2
Tubulin tyrosine ligase-like 2.
      
 0.797
Tapt1
Transmembrane anterior posterior transformation 1.
    
   0.707
Ccdc47
Coiled-coil domain-containing protein 47; Involved in the regulation of calcium ion homeostasis in the endoplasmic reticulum (By similarity). Required for proper protein degradation via the ERAD pathway. Has an essential role in the maintenance of endoplasmic reticulum organization during embryogenesis (By similarity).
   
  
 0.677
Fam120a
Family with sequence similarity 120A.
      
 0.652
Bcap29
B-cell receptor-associated protein 29.
    
 
 0.608
Impad1
Golgi-resident adenosine 3',5'-bisphosphate 3'-phosphatase.
      
 0.598
ENSRNOP00000066904
Inositol monophosphatase domain containing 1.
      
 0.581
Rd3
Retinal degeneration 3, GUCY2D regulator.
      
 0.533
Twsg1
Twisted gastrulation homolog 1 (Drosophila) (Predicted), isoform CRA_b.
      
 0.488
Bmp2k
BMP2 inducible kinase.
   
  
 0.486
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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