Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cd19 | Ebf1 | ENSRNOP00000051906 | ENSRNOP00000068319 | CD19 molecule. | Transcription factor COE1; Transcriptional activator which recognizes variations of the palindromic sequence 5'-ATTCCCNNGGGAATT-3'; Belongs to the COE family. | 0.548 |
Cd19 | Ikzf1 | ENSRNOP00000051906 | ENSRNOP00000069446 | CD19 molecule. | Similar to DNA-binding protein Ikaros form 1-mouse (Predicted), isoform CRA_a. | 0.515 |
Cd19 | Pax5 | ENSRNOP00000051906 | ENSRNOP00000030607 | CD19 molecule. | Paired box 5. | 0.792 |
Cd19 | Spi1 | ENSRNOP00000051906 | ENSRNOP00000016306 | CD19 molecule. | Transcription factor PU.1; Binds to the PU-box, a purine-rich DNA sequence (5'-GAGGAA- 3') that can act as a lymphoid-specific enhancer. This protein is a transcriptional activator that may be specifically involved in the differentiation or activation of macrophages or B-cells. Also binds RNA and may modulate pre-mRNA splicing (By similarity). | 0.561 |
Ebf1 | Cd19 | ENSRNOP00000068319 | ENSRNOP00000051906 | Transcription factor COE1; Transcriptional activator which recognizes variations of the palindromic sequence 5'-ATTCCCNNGGGAATT-3'; Belongs to the COE family. | CD19 molecule. | 0.548 |
Ebf1 | Ikzf1 | ENSRNOP00000068319 | ENSRNOP00000069446 | Transcription factor COE1; Transcriptional activator which recognizes variations of the palindromic sequence 5'-ATTCCCNNGGGAATT-3'; Belongs to the COE family. | Similar to DNA-binding protein Ikaros form 1-mouse (Predicted), isoform CRA_a. | 0.595 |
Ebf1 | Lhx2 | ENSRNOP00000068319 | ENSRNOP00000014452 | Transcription factor COE1; Transcriptional activator which recognizes variations of the palindromic sequence 5'-ATTCCCNNGGGAATT-3'; Belongs to the COE family. | LIM/homeobox protein Lhx2; Acts as a transcriptional activator. Stimulates the promoter of the alpha-glycoprotein gene. Transcriptional regulatory protein involved in the control of cell differentiation in developing lymphoid and neural cell types (By similarity). | 0.547 |
Ebf1 | Pax5 | ENSRNOP00000068319 | ENSRNOP00000030607 | Transcription factor COE1; Transcriptional activator which recognizes variations of the palindromic sequence 5'-ATTCCCNNGGGAATT-3'; Belongs to the COE family. | Paired box 5. | 0.801 |
Ebf1 | Prdm16 | ENSRNOP00000068319 | ENSRNOP00000064955 | Transcription factor COE1; Transcriptional activator which recognizes variations of the palindromic sequence 5'-ATTCCCNNGGGAATT-3'; Belongs to the COE family. | PR/SET domain 16. | 0.552 |
Ebf1 | Spi1 | ENSRNOP00000068319 | ENSRNOP00000016306 | Transcription factor COE1; Transcriptional activator which recognizes variations of the palindromic sequence 5'-ATTCCCNNGGGAATT-3'; Belongs to the COE family. | Transcription factor PU.1; Binds to the PU-box, a purine-rich DNA sequence (5'-GAGGAA- 3') that can act as a lymphoid-specific enhancer. This protein is a transcriptional activator that may be specifically involved in the differentiation or activation of macrophages or B-cells. Also binds RNA and may modulate pre-mRNA splicing (By similarity). | 0.600 |
Ebf1 | Tet2 | ENSRNOP00000068319 | ENSRNOP00000048956 | Transcription factor COE1; Transcriptional activator which recognizes variations of the palindromic sequence 5'-ATTCCCNNGGGAATT-3'; Belongs to the COE family. | Tet methylcytosine dioxygenase 2. | 0.635 |
Ebf1 | Ufd1 | ENSRNOP00000068319 | ENSRNOP00000067081 | Transcription factor COE1; Transcriptional activator which recognizes variations of the palindromic sequence 5'-ATTCCCNNGGGAATT-3'; Belongs to the COE family. | Ubiquitin recognition factor in ER-associated degradation protein 1; Essential component of the ubiquitin-dependent proteolytic pathway which degrades ubiquitin fusion proteins. The ternary complex containing UFD1, VCP and NPLOC4 binds ubiquitinated proteins and is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome. The NPLOC4-UFD1- VCP complex regulates spindle disassembly at the end of mitosis and is necessary for the formation of a closed nuclear envelope. It may be involved in the development of some ectoderm-deriv [...] | 0.568 |
Ebf1 | Zfp423 | ENSRNOP00000068319 | ENSRNOP00000020028 | Transcription factor COE1; Transcriptional activator which recognizes variations of the palindromic sequence 5'-ATTCCCNNGGGAATT-3'; Belongs to the COE family. | Zinc finger protein 423; Transcription factor that can both act as an activator or a repressor depending on the context. Plays a central role in BMP signaling and olfactory neurogenesis. Associates with SMADs in response to BMP2 leading to activate transcription of BMP target genes. Acts as a transcriptional repressor via its interaction with EBF1, a transcription factor involved in terminal olfactory receptor neurons differentiation; this interaction preventing EBF1 to bind DNA and activate olfactory-specific genes. Involved in olfactory neurogenesis by participating in a developmenta [...] | 0.841 |
Ebf1 | Zfp521 | ENSRNOP00000068319 | ENSRNOP00000068573 | Transcription factor COE1; Transcriptional activator which recognizes variations of the palindromic sequence 5'-ATTCCCNNGGGAATT-3'; Belongs to the COE family. | Zinc finger protein 521. | 0.801 |
Ikzf1 | Cd19 | ENSRNOP00000069446 | ENSRNOP00000051906 | Similar to DNA-binding protein Ikaros form 1-mouse (Predicted), isoform CRA_a. | CD19 molecule. | 0.515 |
Ikzf1 | Ebf1 | ENSRNOP00000069446 | ENSRNOP00000068319 | Similar to DNA-binding protein Ikaros form 1-mouse (Predicted), isoform CRA_a. | Transcription factor COE1; Transcriptional activator which recognizes variations of the palindromic sequence 5'-ATTCCCNNGGGAATT-3'; Belongs to the COE family. | 0.595 |
Ikzf1 | Pax5 | ENSRNOP00000069446 | ENSRNOP00000030607 | Similar to DNA-binding protein Ikaros form 1-mouse (Predicted), isoform CRA_a. | Paired box 5. | 0.833 |
Ikzf1 | Spi1 | ENSRNOP00000069446 | ENSRNOP00000016306 | Similar to DNA-binding protein Ikaros form 1-mouse (Predicted), isoform CRA_a. | Transcription factor PU.1; Binds to the PU-box, a purine-rich DNA sequence (5'-GAGGAA- 3') that can act as a lymphoid-specific enhancer. This protein is a transcriptional activator that may be specifically involved in the differentiation or activation of macrophages or B-cells. Also binds RNA and may modulate pre-mRNA splicing (By similarity). | 0.790 |
Lhx2 | Ebf1 | ENSRNOP00000014452 | ENSRNOP00000068319 | LIM/homeobox protein Lhx2; Acts as a transcriptional activator. Stimulates the promoter of the alpha-glycoprotein gene. Transcriptional regulatory protein involved in the control of cell differentiation in developing lymphoid and neural cell types (By similarity). | Transcription factor COE1; Transcriptional activator which recognizes variations of the palindromic sequence 5'-ATTCCCNNGGGAATT-3'; Belongs to the COE family. | 0.547 |
Pax5 | Cd19 | ENSRNOP00000030607 | ENSRNOP00000051906 | Paired box 5. | CD19 molecule. | 0.792 |
page 1 of 2