Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADAM2 | SPAM1 | ENSCPOP00000017917 | ENSCPOP00000001550 | Disintegrin and metalloproteinase domain-containing protein 2; Sperm surface membrane protein that may be involved in sperm- egg plasma membrane adhesion and fusion during fertilization. Could have a direct role in sperm-zona binding or migration of sperm from the uterus into the oviduct. Interactions with egg membrane could be mediated via binding between its disintegrin-like domain to one or more integrins receptors on the egg. This is a non catalytic metalloprotease-like protein (By similarity). | Hyaluronidase PH-20; Involved in sperm-egg adhesion. Upon fertilization sperm must first penetrate a layer of cumulus cells that surrounds the egg before reaching the zona pellucida. The cumulus cells are embedded in a matrix containing hyaluronic acid which is formed prior to ovulation. This protein aids in penetrating the layer of cumulus cells by digesting hyaluronic acid. | 0.772 |
ARFGAP1 | GBF1 | ENSCPOP00000025865 | ENSCPOP00000004072 | ADP ribosylation factor GTPase activating protein 1. | Golgi brefeldin A resistant guanine nucleotide exchange factor 1. | 0.885 |
ARFGAP1 | SPAM1 | ENSCPOP00000025865 | ENSCPOP00000001550 | ADP ribosylation factor GTPase activating protein 1. | Hyaluronidase PH-20; Involved in sperm-egg adhesion. Upon fertilization sperm must first penetrate a layer of cumulus cells that surrounds the egg before reaching the zona pellucida. The cumulus cells are embedded in a matrix containing hyaluronic acid which is formed prior to ovulation. This protein aids in penetrating the layer of cumulus cells by digesting hyaluronic acid. | 0.770 |
ARSB | GAK | ENSCPOP00000031253 | ENSCPOP00000025229 | Arylsulfatase B. | Cyclin G associated kinase. | 0.414 |
ARSB | GUSB | ENSCPOP00000031253 | ENSCPOP00000004223 | Arylsulfatase B. | Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family. | 0.714 |
ARSB | IDUA | ENSCPOP00000031253 | ENSCPOP00000012425 | Arylsulfatase B. | Iduronidase alpha-L-. | 0.846 |
ARSB | SPAM1 | ENSCPOP00000031253 | ENSCPOP00000001550 | Arylsulfatase B. | Hyaluronidase PH-20; Involved in sperm-egg adhesion. Upon fertilization sperm must first penetrate a layer of cumulus cells that surrounds the egg before reaching the zona pellucida. The cumulus cells are embedded in a matrix containing hyaluronic acid which is formed prior to ovulation. This protein aids in penetrating the layer of cumulus cells by digesting hyaluronic acid. | 0.914 |
GAK | ARSB | ENSCPOP00000025229 | ENSCPOP00000031253 | Cyclin G associated kinase. | Arylsulfatase B. | 0.414 |
GAK | ITSN1 | ENSCPOP00000025229 | ENSCPOP00000000630 | Cyclin G associated kinase. | Intersectin 1. | 0.802 |
GAK | ITSN2 | ENSCPOP00000025229 | ENSCPOP00000012160 | Cyclin G associated kinase. | Intersectin 2. | 0.865 |
GAK | MST1R | ENSCPOP00000025229 | ENSCPOP00000028150 | Cyclin G associated kinase. | Macrophage stimulating 1 receptor. | 0.735 |
GAK | SPAM1 | ENSCPOP00000025229 | ENSCPOP00000001550 | Cyclin G associated kinase. | Hyaluronidase PH-20; Involved in sperm-egg adhesion. Upon fertilization sperm must first penetrate a layer of cumulus cells that surrounds the egg before reaching the zona pellucida. The cumulus cells are embedded in a matrix containing hyaluronic acid which is formed prior to ovulation. This protein aids in penetrating the layer of cumulus cells by digesting hyaluronic acid. | 0.802 |
GBF1 | ARFGAP1 | ENSCPOP00000004072 | ENSCPOP00000025865 | Golgi brefeldin A resistant guanine nucleotide exchange factor 1. | ADP ribosylation factor GTPase activating protein 1. | 0.885 |
GBF1 | SPAM1 | ENSCPOP00000004072 | ENSCPOP00000001550 | Golgi brefeldin A resistant guanine nucleotide exchange factor 1. | Hyaluronidase PH-20; Involved in sperm-egg adhesion. Upon fertilization sperm must first penetrate a layer of cumulus cells that surrounds the egg before reaching the zona pellucida. The cumulus cells are embedded in a matrix containing hyaluronic acid which is formed prior to ovulation. This protein aids in penetrating the layer of cumulus cells by digesting hyaluronic acid. | 0.770 |
GUSB | ARSB | ENSCPOP00000004223 | ENSCPOP00000031253 | Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family. | Arylsulfatase B. | 0.714 |
GUSB | IDUA | ENSCPOP00000004223 | ENSCPOP00000012425 | Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family. | Iduronidase alpha-L-. | 0.582 |
GUSB | SPAM1 | ENSCPOP00000004223 | ENSCPOP00000001550 | Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family. | Hyaluronidase PH-20; Involved in sperm-egg adhesion. Upon fertilization sperm must first penetrate a layer of cumulus cells that surrounds the egg before reaching the zona pellucida. The cumulus cells are embedded in a matrix containing hyaluronic acid which is formed prior to ovulation. This protein aids in penetrating the layer of cumulus cells by digesting hyaluronic acid. | 0.923 |
IDUA | ARSB | ENSCPOP00000012425 | ENSCPOP00000031253 | Iduronidase alpha-L-. | Arylsulfatase B. | 0.846 |
IDUA | GUSB | ENSCPOP00000012425 | ENSCPOP00000004223 | Iduronidase alpha-L-. | Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family. | 0.582 |
IDUA | SPAM1 | ENSCPOP00000012425 | ENSCPOP00000001550 | Iduronidase alpha-L-. | Hyaluronidase PH-20; Involved in sperm-egg adhesion. Upon fertilization sperm must first penetrate a layer of cumulus cells that surrounds the egg before reaching the zona pellucida. The cumulus cells are embedded in a matrix containing hyaluronic acid which is formed prior to ovulation. This protein aids in penetrating the layer of cumulus cells by digesting hyaluronic acid. | 0.818 |
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