Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSCPOP00000026160 | LGR5 | ENSCPOP00000026160 | ENSCPOP00000027425 | Uncharacterized protein. | Leucine rich repeat containing G protein-coupled receptor 5. | 0.519 |
ENSCPOP00000026160 | RXFP2 | ENSCPOP00000026160 | ENSCPOP00000008221 | Uncharacterized protein. | Relaxin family peptide receptor 2. | 0.502 |
ENSCPOP00000026160 | Rxfp1 | ENSCPOP00000026160 | ENSCPOP00000013993 | Uncharacterized protein. | Relaxin/insulin-like family peptide receptor 1. | 0.502 |
ENSCPOP00000026160 | SLC26A11 | ENSCPOP00000026160 | ENSCPOP00000004690 | Uncharacterized protein. | Solute carrier family 26 member 11. | 0.600 |
GATB | SLC26A11 | ENSCPOP00000004521 | ENSCPOP00000004690 | Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. | Solute carrier family 26 member 11. | 0.623 |
LGR5 | ENSCPOP00000026160 | ENSCPOP00000027425 | ENSCPOP00000026160 | Leucine rich repeat containing G protein-coupled receptor 5. | Uncharacterized protein. | 0.519 |
LGR5 | RXFP2 | ENSCPOP00000027425 | ENSCPOP00000008221 | Leucine rich repeat containing G protein-coupled receptor 5. | Relaxin family peptide receptor 2. | 0.507 |
LGR5 | Rxfp1 | ENSCPOP00000027425 | ENSCPOP00000013993 | Leucine rich repeat containing G protein-coupled receptor 5. | Relaxin/insulin-like family peptide receptor 1. | 0.519 |
LGR5 | SLC26A11 | ENSCPOP00000027425 | ENSCPOP00000004690 | Leucine rich repeat containing G protein-coupled receptor 5. | Solute carrier family 26 member 11. | 0.600 |
Lyrm4 | MRE11 | ENSCPOP00000024003 | ENSCPOP00000013122 | Uncharacterized protein; Belongs to the complex I LYR family. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.914 |
Lyrm4 | ND4 | ENSCPOP00000024003 | ENSCPOP00000014217 | Uncharacterized protein; Belongs to the complex I LYR family. | NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.616 |
Lyrm4 | SLC26A11 | ENSCPOP00000024003 | ENSCPOP00000004690 | Uncharacterized protein; Belongs to the complex I LYR family. | Solute carrier family 26 member 11. | 0.668 |
MRE11 | Lyrm4 | ENSCPOP00000013122 | ENSCPOP00000024003 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Uncharacterized protein; Belongs to the complex I LYR family. | 0.914 |
MRE11 | SLC26A11 | ENSCPOP00000013122 | ENSCPOP00000004690 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Solute carrier family 26 member 11. | 0.606 |
ND4 | Lyrm4 | ENSCPOP00000014217 | ENSCPOP00000024003 | NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | Uncharacterized protein; Belongs to the complex I LYR family. | 0.616 |
ND4 | SLC26A11 | ENSCPOP00000014217 | ENSCPOP00000004690 | NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | Solute carrier family 26 member 11. | 0.623 |
RXFP2 | ENSCPOP00000026160 | ENSCPOP00000008221 | ENSCPOP00000026160 | Relaxin family peptide receptor 2. | Uncharacterized protein. | 0.502 |
RXFP2 | LGR5 | ENSCPOP00000008221 | ENSCPOP00000027425 | Relaxin family peptide receptor 2. | Leucine rich repeat containing G protein-coupled receptor 5. | 0.507 |
RXFP2 | Rxfp1 | ENSCPOP00000008221 | ENSCPOP00000013993 | Relaxin family peptide receptor 2. | Relaxin/insulin-like family peptide receptor 1. | 0.856 |
RXFP2 | SLC26A11 | ENSCPOP00000008221 | ENSCPOP00000004690 | Relaxin family peptide receptor 2. | Solute carrier family 26 member 11. | 0.600 |
page 1 of 2