Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CACTIN | PAX6 | ENSCPOP00000003502 | ENSCPOP00000006528 | Cactin, spliceosome C complex subunit. | Paired box 6. | 0.810 |
CACTIN | Sdhd | ENSCPOP00000003502 | ENSCPOP00000002878 | Cactin, spliceosome C complex subunit. | Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family. | 0.870 |
CACTIN | TIMM10 | ENSCPOP00000003502 | ENSCPOP00000022763 | Cactin, spliceosome C complex subunit. | Translocase of inner mitochondrial membrane 10. | 0.966 |
CACTIN | TIMM9 | ENSCPOP00000003502 | ENSCPOP00000029729 | Cactin, spliceosome C complex subunit. | Translocase of inner mitochondrial membrane 9. | 0.877 |
CISD2 | PAX6 | ENSCPOP00000030802 | ENSCPOP00000006528 | CDGSH iron sulfur domain 2. | Paired box 6. | 0.792 |
CISD2 | Sdhd | ENSCPOP00000030802 | ENSCPOP00000002878 | CDGSH iron sulfur domain 2. | Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family. | 0.870 |
CISD2 | TIMM10 | ENSCPOP00000030802 | ENSCPOP00000022763 | CDGSH iron sulfur domain 2. | Translocase of inner mitochondrial membrane 10. | 0.966 |
CISD2 | TIMM9 | ENSCPOP00000030802 | ENSCPOP00000029729 | CDGSH iron sulfur domain 2. | Translocase of inner mitochondrial membrane 9. | 0.877 |
FOXA2 | INS | ENSCPOP00000026387 | ENSCPOP00000026989 | Forkhead box A2. | Insulin A chain; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. | 0.484 |
FOXA2 | NEUROD1 | ENSCPOP00000026387 | ENSCPOP00000019233 | Forkhead box A2. | Neurogenic differentiation factor. | 0.441 |
FOXA2 | PAX6 | ENSCPOP00000026387 | ENSCPOP00000006528 | Forkhead box A2. | Paired box 6. | 0.763 |
FOXA2 | SOX17 | ENSCPOP00000026387 | ENSCPOP00000000803 | Forkhead box A2. | SRY-box transcription factor 17. | 0.795 |
INS | FOXA2 | ENSCPOP00000026989 | ENSCPOP00000026387 | Insulin A chain; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. | Forkhead box A2. | 0.484 |
INS | NEUROD1 | ENSCPOP00000026989 | ENSCPOP00000019233 | Insulin A chain; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. | Neurogenic differentiation factor. | 0.512 |
INS | PAX6 | ENSCPOP00000026989 | ENSCPOP00000006528 | Insulin A chain; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. | Paired box 6. | 0.759 |
INS | SOX17 | ENSCPOP00000026989 | ENSCPOP00000000803 | Insulin A chain; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. | SRY-box transcription factor 17. | 0.600 |
NEUROD1 | FOXA2 | ENSCPOP00000019233 | ENSCPOP00000026387 | Neurogenic differentiation factor. | Forkhead box A2. | 0.441 |
NEUROD1 | INS | ENSCPOP00000019233 | ENSCPOP00000026989 | Neurogenic differentiation factor. | Insulin A chain; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. | 0.512 |
NEUROD1 | PAX6 | ENSCPOP00000019233 | ENSCPOP00000006528 | Neurogenic differentiation factor. | Paired box 6. | 0.757 |
PAX6 | CACTIN | ENSCPOP00000006528 | ENSCPOP00000003502 | Paired box 6. | Cactin, spliceosome C complex subunit. | 0.810 |
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