Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDX58 | PML | ENSCPOP00000001442 | ENSCPOP00000001181 | DExD/H-box helicase 58. | Promyelocytic leukemia. | 0.475 |
DDX58 | Tmbim4 | ENSCPOP00000001442 | ENSCPOP00000006965 | DExD/H-box helicase 58. | Uncharacterized protein; Belongs to the BI1 family. | 0.437 |
KRTCAP2 | TMEM147 | ENSCPOP00000031847 | ENSCPOP00000027070 | Keratinocyte associated protein 2. | Transmembrane protein 147. | 0.448 |
KRTCAP2 | Tmbim4 | ENSCPOP00000031847 | ENSCPOP00000006965 | Keratinocyte associated protein 2. | Uncharacterized protein; Belongs to the BI1 family. | 0.443 |
LEMD3 | Tmbim4 | ENSCPOP00000030739 | ENSCPOP00000006965 | LEM domain containing 3. | Uncharacterized protein; Belongs to the BI1 family. | 0.552 |
PDZK1IP1 | Tmbim4 | ENSCPOP00000029632 | ENSCPOP00000006965 | PDZK1 interacting protein 1. | Uncharacterized protein; Belongs to the BI1 family. | 0.416 |
PML | DDX58 | ENSCPOP00000001181 | ENSCPOP00000001442 | Promyelocytic leukemia. | DExD/H-box helicase 58. | 0.475 |
PML | Tmbim4 | ENSCPOP00000001181 | ENSCPOP00000006965 | Promyelocytic leukemia. | Uncharacterized protein; Belongs to the BI1 family. | 0.560 |
RCN2 | Tmbim4 | ENSCPOP00000024102 | ENSCPOP00000006965 | Reticulocalbin 2. | Uncharacterized protein; Belongs to the BI1 family. | 0.436 |
SIGMAR1 | TMEM97 | ENSCPOP00000031165 | ENSCPOP00000002856 | Sigma non-opioid intracellular receptor 1; Functions in lipid transport from the endoplasmic reticulum and is involved in a wide array of cellular functions probably through regulation of the biogenesis of lipid microdomains at the plasma membrane. Involved in the regulation of different receptors it plays a role in BDNF signaling and EGF signaling. Also regulates ion channels like the potassium channel and could modulate neurotransmitter release. Plays a role in calcium signaling through modulation together with ANK2 of the ITP3R-dependent calcium efflux at the endoplasmic reticulum. [...] | Transmembrane protein 97; Intracellular orphan receptor that binds numerous drugs and which is highly expressed in various proliferating cells. Corresponds to the sigma-2 receptor, which is thought to play important role in regulating cell survival, morphology and differentiation. May play a role as a regulator of cellular cholesterol homeostasis. May function as sterol isomerase. May alter the activity of some cytochrome P450 proteins. | 0.767 |
SIGMAR1 | Tmbim4 | ENSCPOP00000031165 | ENSCPOP00000006965 | Sigma non-opioid intracellular receptor 1; Functions in lipid transport from the endoplasmic reticulum and is involved in a wide array of cellular functions probably through regulation of the biogenesis of lipid microdomains at the plasma membrane. Involved in the regulation of different receptors it plays a role in BDNF signaling and EGF signaling. Also regulates ion channels like the potassium channel and could modulate neurotransmitter release. Plays a role in calcium signaling through modulation together with ANK2 of the ITP3R-dependent calcium efflux at the endoplasmic reticulum. [...] | Uncharacterized protein; Belongs to the BI1 family. | 0.517 |
TMEM147 | KRTCAP2 | ENSCPOP00000027070 | ENSCPOP00000031847 | Transmembrane protein 147. | Keratinocyte associated protein 2. | 0.448 |
TMEM147 | Tmbim4 | ENSCPOP00000027070 | ENSCPOP00000006965 | Transmembrane protein 147. | Uncharacterized protein; Belongs to the BI1 family. | 0.457 |
TMEM97 | SIGMAR1 | ENSCPOP00000002856 | ENSCPOP00000031165 | Transmembrane protein 97; Intracellular orphan receptor that binds numerous drugs and which is highly expressed in various proliferating cells. Corresponds to the sigma-2 receptor, which is thought to play important role in regulating cell survival, morphology and differentiation. May play a role as a regulator of cellular cholesterol homeostasis. May function as sterol isomerase. May alter the activity of some cytochrome P450 proteins. | Sigma non-opioid intracellular receptor 1; Functions in lipid transport from the endoplasmic reticulum and is involved in a wide array of cellular functions probably through regulation of the biogenesis of lipid microdomains at the plasma membrane. Involved in the regulation of different receptors it plays a role in BDNF signaling and EGF signaling. Also regulates ion channels like the potassium channel and could modulate neurotransmitter release. Plays a role in calcium signaling through modulation together with ANK2 of the ITP3R-dependent calcium efflux at the endoplasmic reticulum. [...] | 0.767 |
TMEM97 | Tmbim4 | ENSCPOP00000002856 | ENSCPOP00000006965 | Transmembrane protein 97; Intracellular orphan receptor that binds numerous drugs and which is highly expressed in various proliferating cells. Corresponds to the sigma-2 receptor, which is thought to play important role in regulating cell survival, morphology and differentiation. May play a role as a regulator of cellular cholesterol homeostasis. May function as sterol isomerase. May alter the activity of some cytochrome P450 proteins. | Uncharacterized protein; Belongs to the BI1 family. | 0.426 |
Tmbim4 | DDX58 | ENSCPOP00000006965 | ENSCPOP00000001442 | Uncharacterized protein; Belongs to the BI1 family. | DExD/H-box helicase 58. | 0.437 |
Tmbim4 | KRTCAP2 | ENSCPOP00000006965 | ENSCPOP00000031847 | Uncharacterized protein; Belongs to the BI1 family. | Keratinocyte associated protein 2. | 0.443 |
Tmbim4 | LEMD3 | ENSCPOP00000006965 | ENSCPOP00000030739 | Uncharacterized protein; Belongs to the BI1 family. | LEM domain containing 3. | 0.552 |
Tmbim4 | PDZK1IP1 | ENSCPOP00000006965 | ENSCPOP00000029632 | Uncharacterized protein; Belongs to the BI1 family. | PDZK1 interacting protein 1. | 0.416 |
Tmbim4 | PML | ENSCPOP00000006965 | ENSCPOP00000001181 | Uncharacterized protein; Belongs to the BI1 family. | Promyelocytic leukemia. | 0.560 |
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