Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLDN10 | SHD | ENSCPOP00000027649 | ENSCPOP00000007281 | Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. | Src homology 2 domain containing transforming protein D. | 0.405 |
CLDN10 | SLC6A12 | ENSCPOP00000027649 | ENSCPOP00000023112 | Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | 0.405 |
CYFIP2 | SHD | ENSCPOP00000022054 | ENSCPOP00000007281 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | Src homology 2 domain containing transforming protein D. | 0.457 |
CYFIP2 | SRC | ENSCPOP00000022054 | ENSCPOP00000021377 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | Tyrosine-protein kinase. | 0.623 |
CYFIP2 | YES1 | ENSCPOP00000022054 | ENSCPOP00000014047 | Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. | Tyrosine-protein kinase. | 0.623 |
ITK | SHD | ENSCPOP00000009249 | ENSCPOP00000007281 | Tyrosine-protein kinase. | Src homology 2 domain containing transforming protein D. | 0.412 |
ITK | SRC | ENSCPOP00000009249 | ENSCPOP00000021377 | Tyrosine-protein kinase. | Tyrosine-protein kinase. | 0.771 |
ITK | YES1 | ENSCPOP00000009249 | ENSCPOP00000014047 | Tyrosine-protein kinase. | Tyrosine-protein kinase. | 0.763 |
KDR | ROCK1 | ENSCPOP00000008975 | ENSCPOP00000009405 | Kinase insert domain receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. | 0.533 |
KDR | ROCK2 | ENSCPOP00000008975 | ENSCPOP00000011391 | Kinase insert domain receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. | 0.545 |
KDR | SHD | ENSCPOP00000008975 | ENSCPOP00000007281 | Kinase insert domain receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Src homology 2 domain containing transforming protein D. | 0.418 |
KDR | SRC | ENSCPOP00000008975 | ENSCPOP00000021377 | Kinase insert domain receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Tyrosine-protein kinase. | 0.900 |
KDR | YES1 | ENSCPOP00000008975 | ENSCPOP00000014047 | Kinase insert domain receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Tyrosine-protein kinase. | 0.900 |
POPDC3 | SHD | ENSCPOP00000029534 | ENSCPOP00000007281 | Popeye domain containing 3. | Src homology 2 domain containing transforming protein D. | 0.512 |
POPDC3 | SLC6A12 | ENSCPOP00000029534 | ENSCPOP00000023112 | Popeye domain containing 3. | Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. | 0.509 |
ROCK1 | KDR | ENSCPOP00000009405 | ENSCPOP00000008975 | Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. | Kinase insert domain receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | 0.533 |
ROCK1 | ROCK2 | ENSCPOP00000009405 | ENSCPOP00000011391 | Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. | Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. | 0.942 |
ROCK1 | SHD | ENSCPOP00000009405 | ENSCPOP00000007281 | Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. | Src homology 2 domain containing transforming protein D. | 0.479 |
ROCK1 | SRC | ENSCPOP00000009405 | ENSCPOP00000021377 | Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. | Tyrosine-protein kinase. | 0.598 |
ROCK1 | YES1 | ENSCPOP00000009405 | ENSCPOP00000014047 | Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. | Tyrosine-protein kinase. | 0.565 |
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