STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BARX2BARX homeobox 2. (242 aa)    
Predicted Functional Partners:
PKNOX2
PBX/knotted 1 homeobox 2.
    
 
 0.598
MYO9A
Myosin IXA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.528
COL22A1
Collagen type XXII alpha 1 chain.
    
 0.514
PHOX2A
Paired like homeobox 2A.
      
0.513
MYO9B
Myosin IXB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.512
GLIS1
GLIS family zinc finger 1.
    
 
 0.487
ISL2
ISL LIM homeobox 2.
    
 
 0.480
PBX1
PBX homeobox 1.
    
 
 0.444
IRX1
Iroquois homeobox 1.
    
 
 0.442
MKX
Mohawk homeobox.
    
 
 0.424
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.