STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC22A6Solute carrier family 22 member 6. (545 aa)    
Predicted Functional Partners:
SUOX
Sulfite oxidase.
     
 0.894
PLA2G4A
Phospholipase A2.
    
 0.764
SLC22A7
Solute carrier family 22 member 7.
  
 
0.714
SLC22A8
Solute carrier family 22 member 8.
  
   
0.701
INTS9
Integrator complex subunit 9.
    
 0.683
INTS1
Integrator complex subunit 1.
    
 0.672
INTS11
Integrator complex subunit 11.
    
 0.667
INTS4
Integrator complex subunit 4.
    
 0.660
INTS3
Integrator complex subunit 3.
    
 0.659
EEF1G
Eukaryotic translation elongation factor 1 gamma.
    
 0.656
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.