STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN7Calpain 7; Belongs to the peptidase C2 family. (812 aa)    
Predicted Functional Partners:
CAPNS1
Calpain small subunit 1.
   
 0.889
H0V7Z8_CAVPO
Uncharacterized protein.
    
 0.802
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.643
PEF1
Penta-EF-hand domain containing 1.
   
 0.598
PDCD6
Programmed cell death 6.
   
 0.598
GCA
Grancalcin.
   
 0.596
SRI
Sorcin.
   
 0.596
OXNAD1
Oxidoreductase NAD binding domain containing 1.
      
 0.549
ENSCPOP00000032565
Uncharacterized protein.
    
 
 0.527
EPC2
Enhancer of polycomb homolog.
   
  
 0.517
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.