STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNPO3Transportin 3. (923 aa)    
Predicted Functional Partners:
Srsf1
Uncharacterized protein.
    
 
 0.966
ADGRD1
Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.938
SRSF9
Serine and arginine rich splicing factor 9.
    
 
 0.869
EPRS1
Glutamyl-prolyl-tRNA synthetase.
   
    0.849
SRSF6
Serine and arginine rich splicing factor 6.
    
 
 0.837
SRSF4
Serine and arginine rich splicing factor 4.
    
 
 0.837
SRSF5
Serine and arginine rich splicing factor 5.
    
 
 0.837
NUP153
Nucleoporin 153.
   
 
 0.805
TNPO1
Transportin 1.
   
 
 0.802
ZNF318
Zinc finger protein 318.
    
 
 0.792
Your Current Organism:
Cavia porcellus
NCBI taxonomy Id: 10141
Other names: C. porcellus, Cavia aperea porcellus, Cavia cobaya, domestic guinea pig, guinea pig
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.