Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001116annotation not available (247 aa)    
Predicted Functional Partners:
MYL1
Myosin light chain 1.
   
 0.989
MYH3
Myosin heavy chain 3.
   
  0.978
MYL2
Myosin light chain 2.
   
 0.962
MYL10
Myosin light chain 10.
   
 0.943
MYH7B
Myosin heavy chain 7B.
   
    0.941
MYL4
Myosin light chain 4.
   
 0.938
MYL3
Myosin light chain 3.
   
 0.932
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.929
MYBPC1
Myosin binding protein C, slow type.
   
 0.915
MYL7
Myosin light chain 7.
   
 0.898
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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