STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRP12LDL receptor related protein 12. (780 aa)    
Predicted Functional Partners:
LRPAP1
LDL receptor related protein associated protein 1.
    
 0.881
MET
MET proto-oncogene, receptor tyrosine kinase.
    
  0.782
ENSODEP00000024866
annotation not available
    
  0.782
APOE
Apolipoprotein E.
   
 0.777
RELN
Reelin.
    
 0.776
APLP1
Amyloid beta precursor like protein 1.
    
 0.772
APOB
Apolipoprotein B.
   
 0.767
CORIN
Corin, serine peptidase.
    
 0.758
PDGFB
Platelet derived growth factor subunit B.
    
 0.742
ENSODEP00000010090
annotation not available
    
 0.715
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.