STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRP12LDL receptor related protein 12. (780 aa)    
Predicted Functional Partners:
EGFLAM
EGF like, fibronectin type III and laminin G domains.
    
 0.883
RELN
Reelin.
    
 0.882
AGRN
Agrin.
    
 0.882
HSPG2
Heparan sulfate proteoglycan 2.
    
0.882
APOE
Apolipoprotein E.
    
 0.867
APOB
Apolipoprotein B.
    
 0.843
LRPAP1
LDL receptor related protein associated protein 1.
    
 0.830
CLU
Clusterin.
    
 0.821
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
    
 
 0.818
LPL
Lipoprotein lipase.
    
 0.814
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.