STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001570annotation not available (124 aa)    
Predicted Functional Partners:
ENSODEP00000015529
annotation not available
    
  0.847
FCER1G
Fc fragment of IgE receptor Ig.
    
 0.844
C1QC
Complement C1q C chain.
   
 0.840
SYK
Spleen associated tyrosine kinase.
    
 0.835
PIGR
Polymeric immunoglobulin receptor.
    
 0.828
ENSODEP00000009872
annotation not available
    
 0.827
LYN
LYN proto-oncogene, Src family tyrosine kinase.
    
  0.826
PLCG2
Phospholipase C gamma 2.
    
 0.825
PLCG1
Phospholipase C gamma 1.
    
 0.825
PLG
Plasminogen.
   
  0.823
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.