Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATG5 | Atg12 | G5BMN2 | G5BL88 | Autophagy protein 5; Involved in autophagic vesicle formation. | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | 0.999 |
ATG5 | DDX58 | G5BMN2 | G5C355 | Autophagy protein 5; Involved in autophagic vesicle formation. | Putative ATP-dependent RNA helicase DDX58. | 0.973 |
ATG5 | Mavs | G5BMN2 | G5B4V0 | Autophagy protein 5; Involved in autophagic vesicle formation. | Mitochondrial antiviral-signaling protein. | 0.975 |
Atg12 | ATG5 | G5BL88 | G5BMN2 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Autophagy protein 5; Involved in autophagic vesicle formation. | 0.999 |
Atg12 | DDX58 | G5BL88 | G5C355 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Putative ATP-dependent RNA helicase DDX58. | 0.973 |
Atg12 | Mavs | G5BL88 | G5B4V0 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Mitochondrial antiviral-signaling protein. | 0.976 |
Cyld | DDX58 | G5C252 | G5C355 | Putative ubiquitin carboxyl-terminal hydrolase CYLD. | Putative ATP-dependent RNA helicase DDX58. | 0.935 |
Cyld | TRAF6 | G5C252 | G5B132 | Putative ubiquitin carboxyl-terminal hydrolase CYLD. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.975 |
DDX58 | ATG5 | G5C355 | G5BMN2 | Putative ATP-dependent RNA helicase DDX58. | Autophagy protein 5; Involved in autophagic vesicle formation. | 0.973 |
DDX58 | Atg12 | G5C355 | G5BL88 | Putative ATP-dependent RNA helicase DDX58. | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | 0.973 |
DDX58 | Cyld | G5C355 | G5C252 | Putative ATP-dependent RNA helicase DDX58. | Putative ubiquitin carboxyl-terminal hydrolase CYLD. | 0.935 |
DDX58 | Dhx58 | G5C355 | G5B0K8 | Putative ATP-dependent RNA helicase DDX58. | Putative ATP-dependent RNA helicase DHX58. | 0.988 |
DDX58 | Eif2ak2 | G5C355 | G5BZ81 | Putative ATP-dependent RNA helicase DDX58. | Interferon-induced, double-stranded RNA-activated protein kinase. | 0.939 |
DDX58 | GW7_08155 | G5C355 | G5BVM3 | Putative ATP-dependent RNA helicase DDX58. | RING finger protein 135. | 0.940 |
DDX58 | Mavs | G5C355 | G5B4V0 | Putative ATP-dependent RNA helicase DDX58. | Mitochondrial antiviral-signaling protein. | 0.999 |
DDX58 | Rnf125 | G5C355 | G5C304 | Putative ATP-dependent RNA helicase DDX58. | E3 ubiquitin-protein ligase RNF125. | 0.944 |
DDX58 | TRAF6 | G5C355 | G5B132 | Putative ATP-dependent RNA helicase DDX58. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.945 |
DDX58 | Trim25 | G5C355 | G5C5J0 | Putative ATP-dependent RNA helicase DDX58. | Tripartite motif-containing protein 25. | 0.996 |
Dhx58 | DDX58 | G5B0K8 | G5C355 | Putative ATP-dependent RNA helicase DHX58. | Putative ATP-dependent RNA helicase DDX58. | 0.988 |
Dhx58 | Eif2ak2 | G5B0K8 | G5BZ81 | Putative ATP-dependent RNA helicase DHX58. | Interferon-induced, double-stranded RNA-activated protein kinase. | 0.649 |
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