STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_027431NAD(P)H:quinone type IV. (150 aa)    
Predicted Functional Partners:
BpHYR1_003786
Riboflavin kinase.
    
  0.688
BpHYR1_019666
Argininosuccinate synthase.
  
 
 0.531
BpHYR1_042778
Argininosuccinate lyase.
    
 0.513
BpHYR1_024559
NmrA-like family domain-containing 1.
  
 
  0.500
BpHYR1_031991
Oxidoreductase HTATIP2 isoform X2.
    
  0.496
BpHYR1_045800
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit mitochondrial.
    
  0.496
BpHYR1_022784
Vitamin K-dependent gamma-carboxylase.
    
  0.484
BpHYR1_031067
Vitamin K-dependent gamma-carboxylase.
    
  0.484
BpHYR1_006217
Cytochrome b-c1 complex subunit mitochondrial.
    
 0.456
BpHYR1_018390
10 kDa heat shock mitochondrial; Belongs to the GroES chaperonin family.
   
 
 0.432
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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