STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_022369Ribosomal LP1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (110 aa)    
Predicted Functional Partners:
BpHYR1_011435
60S acidic ribosomal P2; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.999
BpHYR1_036213
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
BpHYR1_041180
60S ribosomal L30.
   
 0.998
BpHYR1_026317
60S ribosomal L3; Belongs to the universal ribosomal protein uL3 family.
   
 0.998
BpHYR1_026858
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.998
BpHYR1_017255
Ribosomal L24.
   
 0.997
BpHYR1_034848
60S ribosomal L19.
   
 0.997
BpHYR1_021776
60S ribosomal L13.
   
 0.997
BpHYR1_004575
60S ribosomal L14.
   
 0.997
BpHYR1_053600
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 0.997
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.