STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_053663Intraflagellar transport 122-like protein. (349 aa)    
Predicted Functional Partners:
BpHYR1_045419
Intraflagellar transport 140-like protein.
   
 0.926
BpHYR1_016604
WD repeat-containing 35 isoform X1.
   
 0.923
BpHYR1_038455
Intraflagellar transport 43-like protein.
    
 0.922
BpHYR1_044646
Tetratricopeptide repeat 21B.
   
 0.880
BpHYR1_041134
WD repeat-containing.
   
 0.816
BpHYR1_005240
WD repeat-containing 19-like.
   
 0.816
BpHYR1_035870
WD repeat-containing.
   
 0.816
BpHYR1_036158
WD repeat-containing.
   
 0.816
BpHYR1_012115
WD repeat-containing 19.
   
 0.805
BpHYR1_012020
Intraflagellar transport 172-like protein.
   
 0.796
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.