STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_022171Importin-13 isoform X1. (270 aa)    
Predicted Functional Partners:
BpHYR1_046097
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.927
BpHYR1_013204
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
    
 
 0.881
BpHYR1_023663
Mago nashi-like protein.
    
 
 0.875
BpHYR1_026036
Eukaryotic translation initiation factor 5A.
    
 
 0.780
BpHYR1_041135
GTP-binding nuclear Ran.
    
 
 0.764
BpHYR1_054612
GTP-binding nuclear spi1.
    
 
 0.764
BpHYR1_007015
Eukaryotic translation initiation factor X-chromosomal.
    
 
 0.649
BpHYR1_001572
Eukaryotic translation initiation factor Y-chromosomal; Belongs to the eIF-1A family.
    
 
 0.649
BpHYR1_001573
Eukaryotic translation initiation factor X-chromosomal; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
    
 
 0.649
BpHYR1_013940
Importin-4-like.
   
  
 0.568
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.