STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_033149Torsin. (328 aa)    
Predicted Functional Partners:
BpHYR1_021703
Torsin-1A-interacting 2.
    
 
 0.749
BpHYR1_003034
COP9 signalosome complex subunit 4.
   
  0.716
BpHYR1_020528
Stoned B; Belongs to the adaptor complexes medium subunit family.
    
  0.708
BpHYR1_024070
COP9 signalosome complex subunit 2 isoform X2.
   
 
  0.662
BpHYR1_013722
COP9 signalosome complex subunit 5.
     
 0.651
BpHYR1_020736
COP9 signalosome complex subunit 6.
   
 
  0.644
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.