BpHYR1_041985 protein (Brachionus plicatilis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

BpHYR1_041985

1-phosphatidylinositol 4-5-bisphosphate phosphodiesterase epsilon-1-like. (627 aa)

Predicted Functional Partners:

BpHYR1_026106

0.809

BpHYR1_010248

0.781

BpHYR1_032413

0.777

BpHYR1_044089

0.776

BpHYR1_043804

0.774

BpHYR1_013310

0.767

BpHYR1_047407

0.767

BpHYR1_024213

0.767

BpHYR1_033061

0.767

BpHYR1_033058

0.767

Your Current Organism:

Brachionus plicatilis

NCBI taxonomy Id: 10195
Other names: B. plicatilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BpHYR1_010248	BpHYR1_013310	A0A3M7RBQ9	A0A3M7QTD9	Guanine nucleotide-binding G(Q) subunit alpha.	GTPase HRas-like.	0.785
BpHYR1_010248	BpHYR1_024213	A0A3M7RBQ9	A0A3M7RHZ1	Guanine nucleotide-binding G(Q) subunit alpha.	Cold shock domain-containing E1 isoform X3.	0.785
BpHYR1_010248	BpHYR1_033058	A0A3M7RBQ9	A0A3M7RIE8	Guanine nucleotide-binding G(Q) subunit alpha.	Ras-related ralB-A-like.	0.785
BpHYR1_010248	BpHYR1_033061	A0A3M7RBQ9	A0A3M7RI63	Guanine nucleotide-binding G(Q) subunit alpha.	Ras-related Ral-a.	0.785
BpHYR1_010248	BpHYR1_041985	A0A3M7RBQ9	A0A3M7RAR7	Guanine nucleotide-binding G(Q) subunit alpha.	1-phosphatidylinositol 4-5-bisphosphate phosphodiesterase epsilon-1-like.	0.781
BpHYR1_010248	BpHYR1_047407	A0A3M7RBQ9	A0A3M7R9D6	Guanine nucleotide-binding G(Q) subunit alpha.	Cold shock domain-containing E1-like isoform X1.	0.785
BpHYR1_013310	BpHYR1_010248	A0A3M7QTD9	A0A3M7RBQ9	GTPase HRas-like.	Guanine nucleotide-binding G(Q) subunit alpha.	0.785
BpHYR1_013310	BpHYR1_041985	A0A3M7QTD9	A0A3M7RAR7	GTPase HRas-like.	1-phosphatidylinositol 4-5-bisphosphate phosphodiesterase epsilon-1-like.	0.767
BpHYR1_024213	BpHYR1_010248	A0A3M7RHZ1	A0A3M7RBQ9	Cold shock domain-containing E1 isoform X3.	Guanine nucleotide-binding G(Q) subunit alpha.	0.785
BpHYR1_024213	BpHYR1_041985	A0A3M7RHZ1	A0A3M7RAR7	Cold shock domain-containing E1 isoform X3.	1-phosphatidylinositol 4-5-bisphosphate phosphodiesterase epsilon-1-like.	0.767
BpHYR1_026106	BpHYR1_041985	A0A3M7T7P5	A0A3M7RAR7	Kinase; Belongs to the inositol phosphokinase (IPK) family.	1-phosphatidylinositol 4-5-bisphosphate phosphodiesterase epsilon-1-like.	0.809
BpHYR1_026106	BpHYR1_043804	A0A3M7T7P5	A0A3M7RWM9	Kinase; Belongs to the inositol phosphokinase (IPK) family.	Type I inositol 1-4-5-trisphosphate 5-phosphatase-like.	0.827
BpHYR1_032413	BpHYR1_041985	A0A3M7T2E5	A0A3M7RAR7	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha.	1-phosphatidylinositol 4-5-bisphosphate phosphodiesterase epsilon-1-like.	0.777
BpHYR1_033058	BpHYR1_010248	A0A3M7RIE8	A0A3M7RBQ9	Ras-related ralB-A-like.	Guanine nucleotide-binding G(Q) subunit alpha.	0.785
BpHYR1_033058	BpHYR1_041985	A0A3M7RIE8	A0A3M7RAR7	Ras-related ralB-A-like.	1-phosphatidylinositol 4-5-bisphosphate phosphodiesterase epsilon-1-like.	0.767
BpHYR1_033061	BpHYR1_010248	A0A3M7RI63	A0A3M7RBQ9	Ras-related Ral-a.	Guanine nucleotide-binding G(Q) subunit alpha.	0.785
BpHYR1_033061	BpHYR1_041985	A0A3M7RI63	A0A3M7RAR7	Ras-related Ral-a.	1-phosphatidylinositol 4-5-bisphosphate phosphodiesterase epsilon-1-like.	0.767
BpHYR1_041985	BpHYR1_010248	A0A3M7RAR7	A0A3M7RBQ9	1-phosphatidylinositol 4-5-bisphosphate phosphodiesterase epsilon-1-like.	Guanine nucleotide-binding G(Q) subunit alpha.	0.781
BpHYR1_041985	BpHYR1_013310	A0A3M7RAR7	A0A3M7QTD9	1-phosphatidylinositol 4-5-bisphosphate phosphodiesterase epsilon-1-like.	GTPase HRas-like.	0.767
BpHYR1_041985	BpHYR1_024213	A0A3M7RAR7	A0A3M7RHZ1	1-phosphatidylinositol 4-5-bisphosphate phosphodiesterase epsilon-1-like.	Cold shock domain-containing E1 isoform X3.	0.767