STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_020133O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis. (467 aa)    
Predicted Functional Partners:
BpHYR1_002701
L-seryl-tRNA(Sec) kinase.
     
 0.926
BpHYR1_024833
Water dikinase.
     
 0.914
BpHYR1_001382
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
    
 0.889
BpHYR1_006998
Bifunctional glutamate proline--tRNA ligase.
    
 0.864
BpHYR1_014765
Cytochrome b5 reductase 4.
   
 
 0.824
BpHYR1_023508
Rab-3-interacting molecule unc-10.
    
 0.757
BpHYR1_025109
Dual specificity mitogen-activated kinase kinase dSOR1 isoform X2; Belongs to the protein kinase superfamily.
    
 0.744
BpHYR1_033875
CAD-like isoform X3.
   
 0.742
BpHYR1_005085
4-aminobutyrate mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.729
BpHYR1_008906
Alanine--glyoxylate aminotransferase 2-like.
  
 0.729
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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