STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_014571Uncharacterized protein. (523 aa)    
Predicted Functional Partners:
BpHYR1_044023
Ran GTPase-activating 1.
   
 
 0.879
BpHYR1_036189
E3 SUMO-ligase 2.
   
 0.801
BpHYR1_041135
GTP-binding nuclear Ran.
    
 0.769
BpHYR1_054612
GTP-binding nuclear spi1.
    
 0.769
BpHYR1_021140
Ran-binding 3 isoform X2.
    
 
 0.750
BpHYR1_013463
AN1-type zinc finger 4 isoform X1.
    
 0.742
BpHYR1_022734
E3 SUMO-ligase 2-like.
   
 0.721
BpHYR1_017215
Serine threonine-kinase Nek7; Belongs to the protein kinase superfamily.
    
 0.692
BpHYR1_017149
Rab5 GDP GTP exchange factor isoform X3.
    
 0.691
BpHYR1_046097
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.673
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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