STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_034275RRP12 isoform X2. (1451 aa)    
Predicted Functional Partners:
BpHYR1_039238
Periodic tryptophan 2-like protein.
   
 
 0.999
BpHYR1_017132
Bystin.
   
 
 0.999
BpHYR1_023139
Pre-rRNA-processing TSR1-like protein.
   
 
 0.999
BpHYR1_016161
Nucleolar complex 4-like protein.
   
 
 0.997
BpHYR1_052998
Nucleolar 14.
   
 
 0.997
BpHYR1_038941
Nucleolar 58.
   
 
 0.994
BpHYR1_010588
WD repeat-containing 43-like.
   
   0.992
BpHYR1_015339
RNA-binding.
   
 
 0.991
BpHYR1_050721
U3 small nucleolar RNA-associated 14-like protein.
   
 
 0.990
BpHYR1_001190
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.989
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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