STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_034914Trafficking particle complex subunit 13 isoform X1. (164 aa)    
Predicted Functional Partners:
BpHYR1_028628
Trafficking particle complex subunit 12-like.
    
 0.925
BpHYR1_041442
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.916
BpHYR1_039270
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.894
BpHYR1_045417
Trafficking particle complex subunit 11.
   
 0.883
BpHYR1_019426
Trafficking particle complex subunit 2.
    
 0.881
BpHYR1_042471
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.861
BpHYR1_039240
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.847
BpHYR1_008241
Trafficking particle complex subunit 6B.
   
 0.837
BpHYR1_028936
Trafficking particle complex subunit 6B.
   
 0.837
BpHYR1_019870
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
     
 0.797
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.