STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_029464WD repeat-containing 18. (412 aa)    
Predicted Functional Partners:
BpHYR1_041485
Testis-expressed sequence 10 isoform X1.
   
 0.999
BpHYR1_013259
Proliferation-associated 2G4.
  
 
 0.997
BpHYR1_034245
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
  
 0.996
BpHYR1_018736
Proline-glutamic acid-and leucine-rich 1 isoform X1.
   
 0.994
BpHYR1_028827
Notchless-like protein.
   
 
 0.991
BpHYR1_017849
Guanine nucleotide-binding-like 3-like protein.
  
 0.989
BpHYR1_015644
Polynucleotide 5-hydroxyl-kinase NOL9.
   
 0.986
BpHYR1_009801
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 
 0.977
BpHYR1_047123
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.976
BpHYR1_043634
DNA replication factor Cdt1.
   
 0.974
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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