STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_000332Tricarboxylate transport; Belongs to the mitochondrial carrier (TC 2.A.29) family. (307 aa)    
Predicted Functional Partners:
BpHYR1_005118
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.952
BpHYR1_029364
Casein kinase II subunit alpha isoform X2; Belongs to the protein kinase superfamily.
    
   0.856
BpHYR1_050064
Uncharacterized protein.
    
   0.856
BpHYR1_038060
Granulins-like isoform X4.
    
   0.856
BpHYR1_053736
OBG-type G domain-containing protein.
    
   0.856
BpHYR1_043007
ADP-ATP carrier mitochondrial-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
0.814
BpHYR1_053555
ADP-ATP carrier mitochondrial-like; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
0.814
BpHYR1_053960
DNA polymerase epsilon subunit 2.
   
   0.763
BpHYR1_013471
DNA polymerase epsilon subunit 2 isoform X1.
   
   0.763
BpHYR1_023524
Developmentally-regulated GTP-binding 2.
    
   0.747
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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