STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_035048F-box WD repeat-containing 4. (423 aa)    
Predicted Functional Partners:
BpHYR1_006647
S-phase kinase-associated 1; Belongs to the SKP1 family.
    
 0.877
BpHYR1_017504
Cullin; Belongs to the cullin family.
    
  0.826
BpHYR1_030376
Cullin-1; Belongs to the cullin family.
    
  0.826
BpHYR1_000445
Cullin-3 isoform X1; Belongs to the cullin family.
    
  0.782
BpHYR1_053387
Thioredoxin domain-containing 9.
    
   0.738
BpHYR1_014112
T-complex protein 1 subunit delta.
    
 0.654
BpHYR1_033618
T-complex 1 subunit epsilon.
    
  0.651
BpHYR1_053408
T-complex protein 1 subunit gamma.
    
  0.635
BpHYR1_034131
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
    
  0.612
BpHYR1_012804
T-complex 1 subunit theta isoform X2.
    
  0.601
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.