ELS03641.1 protein (Xenococcus sp. PCC7305) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ELS03641.1

Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies). (293 aa)

Predicted Functional Partners:

ELS02390.1

0.888

ELS03067.1

0.774

ELS03549.1

0.773

ELS03376.1

0.770

ELS03642.1

0.762

ELS03401.1

0.625

ELS05355.1

0.625

ELS03680.1

0.477

Your Current Organism:

Xenococcus sp. PCC7305

NCBI taxonomy Id: 102125
Other names: X. sp. PCC 7305, Xenococcus sp. ATCC 29373, Xenococcus sp. PCC 7305

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ELS02390.1	ELS03641.1	Xen7305DRAFT_00021040	Xen7305DRAFT_00033650	Hemoglobin-like flavoprotein; PFAM: Globin; Belongs to the globin family.	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	0.888
ELS03067.1	ELS03401.1	Xen7305DRAFT_00027860	Xen7305DRAFT_00031250	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	PAS domain S-box; PFAM: Protein kinase domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box.	0.521
ELS03067.1	ELS03549.1	Xen7305DRAFT_00027860	Xen7305DRAFT_00032730	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	0.773
ELS03067.1	ELS03641.1	Xen7305DRAFT_00027860	Xen7305DRAFT_00033650	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	0.774
ELS03067.1	ELS03680.1	Xen7305DRAFT_00027860	Xen7305DRAFT_00034040	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	0.498
ELS03067.1	ELS05355.1	Xen7305DRAFT_00027860	Xen7305DRAFT_00050980	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	Hypothetical protein.	0.521
ELS03376.1	ELS03401.1	Xen7305DRAFT_00030980	Xen7305DRAFT_00031250	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	PAS domain S-box; PFAM: Protein kinase domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box.	0.625
ELS03376.1	ELS03549.1	Xen7305DRAFT_00030980	Xen7305DRAFT_00032730	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	0.754
ELS03376.1	ELS03641.1	Xen7305DRAFT_00030980	Xen7305DRAFT_00033650	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	0.770
ELS03376.1	ELS03680.1	Xen7305DRAFT_00030980	Xen7305DRAFT_00034040	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	0.577
ELS03376.1	ELS05355.1	Xen7305DRAFT_00030980	Xen7305DRAFT_00050980	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	Hypothetical protein.	0.625
ELS03401.1	ELS03067.1	Xen7305DRAFT_00031250	Xen7305DRAFT_00027860	PAS domain S-box; PFAM: Protein kinase domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box.	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	0.521
ELS03401.1	ELS03376.1	Xen7305DRAFT_00031250	Xen7305DRAFT_00030980	PAS domain S-box; PFAM: Protein kinase domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box.	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	0.625
ELS03401.1	ELS03549.1	Xen7305DRAFT_00031250	Xen7305DRAFT_00032730	PAS domain S-box; PFAM: Protein kinase domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box.	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	0.625
ELS03401.1	ELS03641.1	Xen7305DRAFT_00031250	Xen7305DRAFT_00033650	PAS domain S-box; PFAM: Protein kinase domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box.	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	0.625
ELS03401.1	ELS03680.1	Xen7305DRAFT_00031250	Xen7305DRAFT_00034040	PAS domain S-box; PFAM: Protein kinase domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box.	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	0.677
ELS03401.1	ELS05355.1	Xen7305DRAFT_00031250	Xen7305DRAFT_00050980	PAS domain S-box; PFAM: Protein kinase domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box.	Hypothetical protein.	0.987
ELS03549.1	ELS03067.1	Xen7305DRAFT_00032730	Xen7305DRAFT_00027860	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	0.773
ELS03549.1	ELS03376.1	Xen7305DRAFT_00032730	Xen7305DRAFT_00030980	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	0.754
ELS03549.1	ELS03401.1	Xen7305DRAFT_00032730	Xen7305DRAFT_00031250	Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).	PAS domain S-box; PFAM: Protein kinase domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box.	0.625