Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ELR99416.1 | ELR99417.1 | GLO73106DRAFT_00032670 | GLO73106DRAFT_00032680 | Hypothetical protein. | PFAM: Rubredoxin; Belongs to the rubredoxin family. | 0.516 |
ELR99416.1 | ELR99418.1 | GLO73106DRAFT_00032670 | GLO73106DRAFT_00032690 | Hypothetical protein. | Putative photosystem II stability/assembly factor-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. | 0.406 |
ELR99416.1 | aroB | GLO73106DRAFT_00032670 | GLO73106DRAFT_00032660 | Hypothetical protein. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.568 |
ELR99417.1 | ELR99416.1 | GLO73106DRAFT_00032680 | GLO73106DRAFT_00032670 | PFAM: Rubredoxin; Belongs to the rubredoxin family. | Hypothetical protein. | 0.516 |
ELR99417.1 | ELR99418.1 | GLO73106DRAFT_00032680 | GLO73106DRAFT_00032690 | PFAM: Rubredoxin; Belongs to the rubredoxin family. | Putative photosystem II stability/assembly factor-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. | 0.763 |
ELR99418.1 | ELR99416.1 | GLO73106DRAFT_00032690 | GLO73106DRAFT_00032670 | Putative photosystem II stability/assembly factor-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. | Hypothetical protein. | 0.406 |
ELR99418.1 | ELR99417.1 | GLO73106DRAFT_00032690 | GLO73106DRAFT_00032680 | Putative photosystem II stability/assembly factor-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity. | PFAM: Rubredoxin; Belongs to the rubredoxin family. | 0.763 |
aroB | ELR99416.1 | GLO73106DRAFT_00032660 | GLO73106DRAFT_00032670 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | Hypothetical protein. | 0.568 |