STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3RKM7_TRIADGTP-binding protein o-rab1. (202 aa)    
Predicted Functional Partners:
B3RTW8_TRIAD
Uso1_p115_head domain-containing protein.
   
 0.993
B3RVH2_TRIAD
Rab-GAP TBC domain-containing protein.
    
 0.986
B3S9Y0_TRIAD
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.985
B3SBN1_TRIAD
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.984
B3SCU5_TRIAD
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.983
B3S6F6_TRIAD
Uncharacterized protein.
    
 0.976
B3RW53_TRIAD
SEC7 domain-containing protein.
    
 0.973
B3RXI1_TRIAD
Uncharacterized protein.
    
 0.973
B3S2G2_TRIAD
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.973
B3RVA1_TRIAD
Uncharacterized protein.
    
 0.967
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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