STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3RVQ8_TRIADH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (237 aa)    
Predicted Functional Partners:
B3RLQ9_TRIAD
PUA domain-containing protein.
   
 0.999
B3RW33_TRIAD
Uncharacterized protein.
   
 0.999
B3S3H1_TRIAD
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.999
B3S5V8_TRIAD
Uncharacterized protein.
   
 0.997
B3S885_TRIAD
Nop domain-containing protein.
  
 0.984
B3S2U4_TRIAD
Nop domain-containing protein.
   
 0.983
B3S7P8_TRIAD
WD_REPEATS_REGION domain-containing protein.
    
 0.967
B3SCL5_TRIAD
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.967
B3RUZ8_TRIAD
CS domain-containing protein.
   
 
 0.939
B3S7Q0_TRIAD
Uncharacterized protein.
   
 0.924
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.