STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3RXM0_TRIADUncharacterized protein. (794 aa)    
Predicted Functional Partners:
B3RZE4_TRIAD
Phosphodiesterase delta-like protein; Belongs to the PDE6D/unc-119 family.
    
 
 0.887
B3RJL7_TRIAD
RanBD1 domain-containing protein.
   
 0.785
B3RTN6_TRIAD
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
 0.782
B3RTP1_TRIAD
Predicted protein; Belongs to the G-protein coupled receptor 2 family.
    
 0.782
B3S4L7_TRIAD
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.782
B3RY26_TRIAD
RanGAP1_C domain-containing protein.
   
 
 0.778
B3RPQ7_TRIAD
Uncharacterized protein.
    
 
 0.726
B3SC75_TRIAD
RanBD1 domain-containing protein.
   
 0.701
B3SC76_TRIAD
RanBD1 domain-containing protein.
   
 0.701
B3RUM8_TRIAD
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.657
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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