STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3S0B1_TRIADUncharacterized protein. (871 aa)    
Predicted Functional Partners:
B3S0E8_TRIAD
ARID domain-containing protein.
    
 0.961
B3S0B0_TRIAD
CHDCT2 domain-containing protein.
 
      0.900
B3S9N2_TRIAD
Retinoblastoma-binding protein 4.
   
 0.899
B3SCN2_TRIAD
Uncharacterized protein.
   
 0.883
B3S807_TRIAD
P66_CC domain-containing protein.
   
 0.881
B3RR39_TRIAD
MBD_C domain-containing protein.
    
 0.870
B3RKW9_TRIAD
Uncharacterized protein.
    
 0.778
B3SDR4_TRIAD
Probable lysine-specific histone demethylase 1; Probable histone demethylase that specifically demethylates 'Lys-4' of histone H3, a specific tag for epigenetic transcriptional activation, thereby acting as a corepressor. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Demethylates both mono- and di-methylated 'Lys-4' of histone H3.
   
 0.690
B3RYW6_TRIAD
Uncharacterized protein.
    
 0.686
B3RYK4_TRIAD
Hist_deacetyl domain-containing protein.
   
 0.607
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.