STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3S182_TRIADc-SKI_SMAD_bind domain-containing protein. (199 aa)    
Predicted Functional Partners:
B3RZ40_TRIAD
Uncharacterized protein.
      
 0.595
B3RVF2_TRIAD
Ubiquitin-like domain-containing protein.
      
 0.584
B3RZM8_TRIAD
Ubiquitin-like domain-containing protein.
      
 0.551
B3RQ28_TRIAD
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
      
 0.548
B3S3W8_TRIAD
ATP-dependent Clp protease proteolytic subunit.
      
 0.548
B3S7E4_TRIAD
BTB domain-containing protein.
      
 0.546
B3SCL3_TRIAD
Small ubiquitin-related modifier.
      
 0.544
B3S9N6_TRIAD
Ubiquitin-fold modifier 1; Ubiquitin-like modifier.
      
 0.542
B3RNI0_TRIAD
Autophagy protein 5; Involved in autophagic vesicle formation.
      
 0.527
B3SAI6_TRIAD
Autophagy-related protein 3.
      
 0.485
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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