STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3S1J0_TRIADUncharacterized protein. (121 aa)    
Predicted Functional Partners:
B3RMG9_TRIAD
Uncharacterized protein.
   
 0.901
B3RYE0_TRIAD
DALR_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.779
RTCB_TRIAD
RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family.
    
 0.604
B3RT55_TRIAD
Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily.
    
 0.560
B3S364_TRIAD
O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis.
      
 0.549
B3S5V8_TRIAD
Uncharacterized protein.
   
  
 0.546
B3RMP1_TRIAD
Uncharacterized protein.
   
    0.541
B3RMG1_TRIAD
Lactamase_B_4 domain-containing protein.
  
  
 0.533
B3RMG2_TRIAD
Lactamase_B domain-containing protein.
  
  
 0.533
B3SC19_TRIAD
Arf-GAP domain-containing protein.
      
 0.400
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.