STRINGSTRING
TriadP1807 protein (Trichoplax adhaerens) - STRING interaction network
"TriadP1807" - Pseudouridine synthase in Trichoplax adhaerens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TriadP1807Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (418 aa)    
Predicted Functional Partners:
TriadP29177
Putative uncharacterized protein (2200 aa)
   
   
  0.680
TriadP54976
Putative uncharacterized protein (1241 aa)
   
   
  0.661
TriadP57795
tRNA pseudouridine synthase (385 aa)
   
   
  0.641
TriadP50723
Putative uncharacterized protein (355 aa)
   
 
  0.633
TriadP56472
Putative uncharacterized protein (450 aa)
   
   
  0.621
TriadP23629
Putative uncharacterized protein (629 aa)
   
   
  0.609
TriadP22091
Putative uncharacterized protein (636 aa)
   
   
  0.609
TriadP50297
Inosine-5’-monophosphate dehydrogenase (512 aa)
   
   
  0.608
TriadP19124
Putative uncharacterized protein (487 aa)
   
   
  0.606
TriadP28251
Putative uncharacterized protein (285 aa)
 
            0.583
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: Placozoa, T. adhaerens, Trichoplax, Trichoplax adhaerens, placozoan, placozoans
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