STRINGSTRING
TriadP21455 protein (Trichoplax adhaerens) - STRING interaction network
"TriadP21455" - Rhomboid-like protein in Trichoplax adhaerens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TriadP21455Rhomboid-like protein (547 aa)    
Predicted Functional Partners:
TriadP50429
Putative uncharacterized protein (530 aa)
   
   
  0.711
TriadP50723
Putative uncharacterized protein (355 aa)
   
        0.591
TriadP28961
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (106 aa)
 
       
  0.559
TriadP62117
Putative uncharacterized protein (456 aa)
           
  0.530
TriadP58967
Putative uncharacterized protein (154 aa)
           
  0.517
TriadP62805
Putative uncharacterized protein (783 aa)
         
  0.486
TriadP55255
Rhomboid-like protein (327 aa)
           
  0.479
TriadP36926
Putative uncharacterized protein (924 aa)
     
   
  0.462
TriadP53057
Putative uncharacterized protein (427 aa)
           
  0.446
TriadP63331
Peptidyl-prolyl cis-trans isomerase ; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (281 aa)
     
 
  0.440
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: Placozoa, T. adhaerens, Trichoplax, Trichoplax adhaerens, placozoan, placozoans
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