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SRP54 protein (Trichoplax adhaerens) - STRING interaction network
"SRP54" - Signal recognition particle 54 kDa protein in Trichoplax adhaerens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRP54Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein); Belongs to the GTP-binding SRP family. SRP54 subfamily (505 aa)    
Predicted Functional Partners:
TriadP63138
annotation not available (134 aa)
   
      0.999
TriadP52953
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (634 aa)
     
 
  0.991
TriadP22815
annotation not available (151 aa)
     
 
  0.987
TriadP38407
Signal recognition particle 9 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding (76 aa)
     
 
  0.987
TriadP58632
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (605 aa)
     
 
  0.978
TriadP61901
annotation not available (102 aa)
     
 
  0.977
TriadP36440
annotation not available (152 aa)
   
 
  0.969
TriadP63137
annotation not available (122 aa)
   
 
  0.959
TriadP36727
annotation not available (151 aa)
 
 
  0.951
TriadP35456
annotation not available (153 aa)
   
 
  0.946
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens, Trichoplax adhaerens
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