• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
TriadP52208 protein (Trichoplax adhaerens) - STRING interaction network
"TriadP52208" - tRNA-dihydrouridine synthase in Trichoplax adhaerens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TriadP52208tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs (309 aa)    
Predicted Functional Partners:
TriadP24290
annotation not available (804 aa)
     
   
  0.895
TriadP50434
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)- methyltransferase, which catalyzes the formation of N(1)- methyladenine at position 58 (m1A58) in initiator methionyl-tRNA (301 aa)
   
   
  0.743
TriadP2329
annotation not available (404 aa)
     
   
  0.689
TriadP60447
annotation not available (191 aa)
     
   
  0.680
TriadP55892
annotation not available (376 aa)
       
      0.601
TriadP59791
annotation not available (456 aa)
     
 
  0.578
TriadP21982
annotation not available (435 aa)
     
        0.533
TriadP55827
Anamorsin homolog; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Electrons are transferred to the Fe-S cluster from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Has anti- apoptotic effects in the cell (278 aa)
     
   
  0.525
TriadP27498
annotation not available (364 aa)
     
   
  0.523
TriadP55049
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (402 aa)
     
        0.515
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens, Trichoplax adhaerens
Server load: low (10%) [HD]